PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000767.1_g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 385aa    MW: 41619.4 Da    PI: 8.4028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000767.1_g00001.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.71.8e-12322367655
                              HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                      HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                              +++Er RR ri +++ +L+el+P+     +k  + a++L +Av+YIk+L+
  Itr_sc000767.1_g00001.1 322 SIAERVRRTRISDRMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLE 367
                              689*********************7....688***************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.212316366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-15319379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.92E-12320371No hitNo description
Gene3DG3DSA:4.10.280.101.2E-15321378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-9322367IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-12322372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MDQTRCQQQQ MTSCLTRFRS APSSYFDTIL NAAAPTPPPA NTGGGGGYAR DDMLSGGGSG  60
PNIQQAFARL IATMGGARDA SSCSSGGASD AKPPLVPPPP KQEPRQEMKY SSESQGFCAG  120
DNSYGLMSPV NPGCFAPVKM NTGVSSSNLT RYNSSPAGFF DQFNIKNGSN ANAAEASFAS  180
PNAFKNRRVG VDLSPRHPPS SSSRQMASIS ETAVKEEACS GDAIGFNEDE TMDESYLSSF  240
PIPSWDDSDL LSDDFLKVTD EKPSLNAKAP DFKNTEGRTR PPARLSHHLS LPKSSAELSS  300
ILQDSVPCRV RAKRGCATHP RSIAERVRRT RISDRMRKLQ ELVPNMDKQT NTADMLDLAV  360
DYIKDLEQKV KRLADNRAKC RCSNK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015061449.11e-101PREDICTED: transcription factor bHLH130-like
TrEMBLA0A0V0IJ501e-101A0A0V0IJ50_SOLCH; Putative transcription factor bHLH-like
STRINGSolyc12g100140.1.11e-99(Solanum lycopersicum)
STRINGPGSC0003DMT4000567161e-99(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-51bHLH family protein